Chapter 10 ยท Introduction

Chapter 10 โ€” Biomolecules

The molecules of life: carbohydrates for energy and structure, proteins and enzymes that build and run the cell, vitamins, the nucleic acids that carry heredity, and the hormones that send its messages.

Every chapter so far has studied molecules made in flasks and factories. This one studies the molecules that made you. A slice of chapati is mostly starch, a chain of thousands of glucose units. Your stomach and intestines break that chain down within hours; your cells oxidise the glucose to release energy; and the instructions for building the enzymes that do all this are written in the sequence of four bases in your DNA, copied from your parents and passed on to every new cell. Biomolecules are organic compounds, and they obey the same rules you have learnt for alcohols, carbonyl compounds, amines and acids.

Three big families of polymers do most of the work. Polysaccharides such as starch and cellulose are chains of sugars joined by glycosidic links; proteins are chains of amino acids joined by peptide bonds and folded into precise shapes; nucleic acids are chains of nucleotides joined by phosphodiester links. All three are built by condensation, one water molecule lost for every link, and taken apart by hydrolysis. Alongside them are the small molecules the body needs in tiny amounts: vitamins, which we must eat, and hormones, which our glands make to carry messages through the blood.

Monosaccharides: glucose, fructoseโ†’Rings and anomersโ†’Di- and polysaccharidesโ†’Amino acids and peptidesโ†’Protein structure, enzymesโ†’Vitaminsโ†’DNA, RNA, hormones
PolymerMonomerLink (water lost)Section
starch, cellulose, glycogenglucoseglycosidic $\mathrm{C{-}O{-}C}$10.1
proteinsฮฑ-amino acidspeptide $\mathrm{{-}CO{-}NH{-}}$10.2
DNA, RNAnucleotidesphosphodiester (3โ€ฒโ€“5โ€ฒ)10.3
๐ŸŽฏ By the end of this chapter you canโ€ฆ
  • classify carbohydrates (mono-, oligo-, polysaccharides; aldoses and ketoses; reducing and non-reducing sugars) and explain the chemical evidence for the open-chain and ring structures of glucose;
  • draw Fischer and Haworth projections of glucose and fructose, identify ฮฑ and ฮฒ anomers and D/L configuration, and describe sucrose, maltose, lactose, starch, cellulose and glycogen and their glycosidic links;
  • classify amino acids, explain the zwitterion and the isoelectric point, and work out peptide formulas, molar masses and sequence counts;
  • describe the primary, secondary, tertiary and quaternary structures of proteins, denaturation, and the action of enzymes as biological catalysts;
  • classify vitamins and name their deficiency diseases; describe the composition of nucleic acids, nucleosides and nucleotides, the DNA double helix and base pairing, the types of RNA and their functions, and give an elementary account of hormones.
Teaser โ€” One Water Molecule per Link

Choose a kind of biopolymer and how many monomer units it has. Press Play to watch the units join one at a time: each new link releases one molecule of water (and hydrolysis would put it back). The readouts compare the molar mass of the chain with that of the separate monomers, using masses computed from atomic masses. Glucose chains appear in Section 10.1, peptides in 10.2 and DNA strands in 10.3.

8
link formedโ€”
links ยท Hโ‚‚O releasedโ€”
monomers (total)โ€”
chain molar massโ€”

See 10.1 Carbohydrates โ†’

Sections in this chapter

โœ… Before you start
You will need the organic chemistry of the earlier chapters: alcohols and their reactions (Chapter 7, Alcohols, Phenols and Ethers), the aldehyde and ketone groups, their tests with Tollens' reagent and Fehling's solution, and the addition of alcohols to aldehydes to give hemiacetals (Chapter 8, Aldehydes, Ketones and Carboxylic Acids), the basic amino group (Chapter 9, Amines), and optical activity and mirror-image molecules (Chapter 6, Haloalkanes and Haloarenes). Section 10.2 uses catalysts, activation energy and the Arrhenius equation (3.3 Temperature and Rate), and Section 10.1 the pseudo-first-order inversion of cane sugar (3.2 Integrated Rate Equations and Half-life). From Class 11 Chemistry you will need molar mass and the mole, hydrogen bonding, IUPAC naming and isomerism (Organic Chemistry: Some Basic Principles and Techniques), and the ideas of acids, bases and pH (Equilibrium).