Reference

Glossary

Every technical word in the course and what it means in plain language, with flashcards for practice.

Every technical term in the course, with a plain-language meaning. On every page these words are marked with a dotted underline: hover or tap one to see its meaning. The “Used in” links point to the sections where each term appears.

Flashcards — term ⇄ meaning
Ch 1 · Solutions
TermMeaningUsed in
azeotropeA liquid mixture that has the same composition as its vapour and boils at a constant temperature, so it cannot be separated by fractional distillation.1.2
colligative propertyA property of a dilute solution that depends only on the number of solute particles, not on their nature: relative lowering of vapour pressure, $\Delta T_{b}$, $\Delta T_{f}$ and osmotic pressure.1.3
cryoscopic constant$K_{f}$, the molal depression constant: the freezing-point fall of a $1\ \mathrm{mol\,kg^{-1}}$ solution; it depends only on the solvent ($1.86\ \mathrm{K\,kg\,mol^{-1}}$ for water).1.3
depression of freezing pointThe fall in freezing point of a solvent caused by a dissolved solute: $\Delta T_{f}=K_{f}\,m$ (times $i$ for electrolytes).1.3
ebullioscopic constant$K_{b}$, the molal elevation constant: the boiling-point rise of a $1\ \mathrm{mol\,kg^{-1}}$ solution; it depends only on the solvent ($0.52\ \mathrm{K\,kg\,mol^{-1}}$ for water).1.3
elevation of boiling pointThe rise in boiling point of a solvent caused by a non-volatile solute: $\Delta T_{b}=K_{b}\,m$ (times $i$ for electrolytes).1.3
Henry's lawAt constant temperature, the solubility of a gas in a liquid is proportional to its partial pressure: $p=K_{H}\,x$. A larger $K_{H}$ means a less soluble gas.1.1 1.2
ideal solutionA solution that obeys Raoult's law at every composition, with $\Delta_{mix}H=0$ and $\Delta_{mix}V=0$ (e.g. hexane + heptane).1.2 1.3
maximum-boiling azeotropeAn azeotrope from a large negative deviation; it boils above both pure components (nitric acid + water, about 68% acid by mass).1.2
minimum-boiling azeotropeAn azeotrope from a large positive deviation; it boils below both pure components (ethanol + water, 95.6% ethanol by mass).1.2
molalityMoles of solute per kilogram of solvent, unit $\mathrm{mol\,kg^{-1}}$ (m); it does not change with temperature.1.1 1.2 1.3
molarityMoles of solute per litre of solution, unit $\mathrm{mol\,L^{-1}}$ (M); it changes slightly with temperature.1.1 1.3 2.3
mole fractionMoles of one component divided by the total moles of all components, $x_{i}=n_{i}/\sum n$; the mole fractions of a solution add up to 1.1.1 1.2 1.3
negative deviationVapour pressure below the Raoult's-law value, because A–B attractions are stronger than A–A and B–B; $\Delta_{mix}H\lt0$ and $\Delta_{mix}V\lt0$.1.2
non-ideal solutionA solution whose vapour pressure is higher (positive deviation) or lower (negative deviation) than Raoult's law predicts.1.2
osmosisNet flow of solvent through a semipermeable membrane (one that passes solvent but not solute) from pure solvent, or a dilute solution, into a more concentrated solution.1.3 2.3
osmotic pressureThe extra pressure that must be applied to a solution to stop solvent flowing into it through a semipermeable membrane: $\pi=CRT$ (times $i$ for electrolytes). Solutions with equal $\pi$ are isotonic.1.3
parts per millionParts of a component per $10^{6}$ parts of the solution (by mass, volume or moles); used for traces. In dilute water, 1 ppm by mass ≈ 1 mg per litre.1.1 1.2 5.1 6.3
positive deviationVapour pressure above the Raoult's-law value, because A–B attractions are weaker than A–A and B–B; usually $\Delta_{mix}H\gt0$ and $\Delta_{mix}V\gt0$.1.2
Raoult's lawFor a solution, the partial vapour pressure of each volatile component is its mole fraction times the vapour pressure of the pure component: $p_{i}=x_{i}\,p_{i}^{\circ}$.1.2
relative lowering of vapour pressure$(p_{1}^{\circ}-p_{1})/p_{1}^{\circ}$; for a dilute solution of a non-volatile non-electrolyte it equals the mole fraction of the solute, $x_{2}$.1.3
reverse osmosisFlow of pure solvent out of a solution through a semipermeable membrane, forced by applying a pressure greater than the osmotic pressure; used to desalinate seawater.1.3
saturated solutionA solution holding as much solute as it can at that temperature (and pressure), in dynamic equilibrium with undissolved solute.1.1 10.1
soluteA component of a solution present in the smaller amount, dissolved in the solvent (e.g. salt in brine).1.1 1.2 1.3 2.1
solventThe component of a solution present in the largest amount; it usually decides the physical state of the solution.1.1 1.2 1.3 2.3
van 't Hoff factor$i$ = normal molar mass ÷ abnormal molar mass = observed ÷ calculated colligative property; $i\gt1$ for dissociation, $i\lt1$ for association.1.3 8.3
vapour pressureThe pressure of a vapour in dynamic equilibrium with its liquid in a closed vessel at a given temperature; it depends only on the liquid and the temperature.1.2 1.3
Ch 2 · Electrochemistry
TermMeaningUsed in
anodeThe electrode at which oxidation occurs. It is the negative terminal of a galvanic cell and is joined to the positive terminal of the supply in electrolysis.2.1 2.2 2.4 4.1
cathodeThe electrode at which reduction occurs. It is the positive terminal of a galvanic cell and is joined to the negative terminal of the supply in electrolysis.2.1 2.2 2.4 4.1
cell constant$G^{*}=l/A$ for a conductivity cell, found as $R\kappa$ with a standard KCl solution; unit cm⁻¹ or m⁻¹.2.3
concentration cellA galvanic cell with the same couple on both sides at different concentrations; $E^{\circ}_{cell}=0$ and the more dilute electrode is the anode.2.2
conductanceThe reciprocal of resistance, $G=1/R$, measured in siemens (S = Ω⁻¹).2.3
conductivityThe reciprocal of resistivity, $\kappa=1/\rho$: the conductance of a 1 cm cube of the solution; unit S m⁻¹ or S cm⁻¹. It falls on dilution.2.3 3.2 4.1 5.1
conductivity cellTwo platinised platinum electrodes fixed a set distance apart, used with an AC Wheatstone bridge to measure the resistance of a solution.2.3
corrosionSlow destruction of a metal by its surroundings through electrochemical oxidation; for iron (rusting) the product is Fe₂O₃·xH₂O.2.1 2.4 4.1
electrochemical cellA device in which a redox reaction is linked to a flow of electrons through an external circuit: galvanic (makes electricity) or electrolytic (uses it).2.1
electrochemical equivalent$Z=M/nF$: the mass of a substance deposited or liberated by one coulomb of charge (g C⁻¹).2.4
electrochemical seriesStandard reduction potentials listed in order: strong oxidising agents at the top (high $E^{\circ}$), strong reducing agents at the bottom (low $E^{\circ}$).2.1
electrode potentialThe potential difference between an electrode and its electrolyte, quoted as a reduction potential: the tendency of the couple to gain electrons.2.1 2.2 4.1
electrolytic cellA cell in which an external DC supply drives a non-spontaneous redox reaction (electrolysis); its cathode is negative and its anode positive.2.1 2.4
electromotive forceThe potential difference between the electrodes of a galvanic cell when no current is drawn; standard value $E^{\circ}_{cell}=E^{\circ}_{R}-E^{\circ}_{L}$.2.1 2.2
Faraday constantThe charge on one mole of electrons, $F=96\,487\ \mathrm{C\,mol^{-1}}$ (often rounded to 96 500).2.2
Faraday's laws of electrolysis(1) The mass liberated is proportional to the charge passed, $m=ZQ=ZIt$. (2) For the same charge, masses are proportional to equivalent masses $M/n$. Together: $m=MIt/nF$.2.4
fuel cellA galvanic cell that turns the energy of a fuel's combustion directly into electricity, with fuel and oxygen supplied continuously; the H₂–O₂ cell gives 1.23 V and only water.2.4
galvanic cellAn electrochemical cell that turns the chemical energy of a spontaneous redox reaction into electrical energy, e.g. the Daniell cell (also called a voltaic cell).2.1 2.2 2.4
hydrogen economyAn energy system in which hydrogen made by electrolysing water with renewable electricity is stored, transported and used as a clean fuel, e.g. in fuel cells.2.4
intensive propertyA property that does not depend on the amount of substance, like temperature or electrode potential; $\Delta_{r}G$ is extensive (it doubles when the equation is doubled), $E$ is not.2.1
Kohlrausch's lawAt infinite dilution each ion contributes independently: $\Lambda_{m}^{\circ}=\nu_{+}\lambda_{+}^{\circ}+\nu_{-}\lambda_{-}^{\circ}$. Used to find $\Lambda_{m}^{\circ}$, α and $K_{a}$ of weak electrolytes.2.3
limiting molar conductivity$\Lambda_{m}^{\circ}$, the molar conductivity at infinite dilution ($c\rightarrow0$); for strong electrolytes the intercept of $\Lambda_{m}$ against $\sqrt{c}$.2.3
molar conductivity$\Lambda_{m}=\kappa/c$, i.e. $\kappa\times1000/c$ in S cm² mol⁻¹ (κ in S cm⁻¹, c in mol L⁻¹). It increases on dilution.2.3 5.1
Nernst equationGives an electrode or cell potential at any concentrations: $E_{cell}=E^{\circ}_{cell}-\tfrac{2.303RT}{nF}\log Q$, i.e. $-\tfrac{0.059}{n}\log Q$ volts at 298 K.2.1 2.2 2.4
overpotentialThe extra voltage, beyond the value from $E^{\circ}$, needed to make a slow electrode reaction (such as O₂ evolution) go at a useful rate; it explains why brine gives Cl₂, not O₂.2.4
primary batteryA battery whose reaction occurs only once and which cannot be recharged, e.g. the dry (Leclanché) cell and the mercury cell.2.4
reaction quotient$Q$: products over reactants, each concentration raised to its coefficient (solids omitted, gases as pressures). It equals $K$ only at equilibrium.2.2
resistivityThe resistance of a conductor of unit length and unit cross-section, $\rho$ in $R=\rho\,l/A$; unit Ω m or Ω cm.2.3
sacrificial protectionProtecting iron by contact with a more reactive metal (Zn, Mg) of lower $E^{\circ}$, which becomes the anode and corrodes instead; galvanising is an example.2.1 2.4
salt bridgeA tube of jelly containing an inert electrolyte (KCl, KNO₃) that joins the two half-cells, completes the circuit through ions and keeps both solutions electrically neutral.2.1 2.2
secondary batteryA rechargeable battery: passing current in the reverse direction reverses its cell reaction, e.g. the lead storage battery and the nickel–cadmium cell.2.4
standard electrode potentialThe electrode potential $E^{\circ}$ when all species are in their standard states (1 mol L⁻¹, 1 bar, pure solids), measured against the standard hydrogen electrode.2.1 4.1
standard hydrogen electrodeThe reference electrode Pt | H₂(g, 1 bar) | H⁺(aq, 1 M), whose potential is defined as exactly 0.00 V at all temperatures (SHE).2.1
strong electrolyteAn electrolyte completely ionised in solution (KCl, NaCl, HCl); its $\Lambda_{m}$ rises only gently on dilution, $\Lambda_{m}=\Lambda_{m}^{\circ}-A\sqrt{c}$.1.3 2.3
weak electrolyteAn electrolyte only partly ionised in solution (ethanoic acid, NH₄OH); its $\Lambda_{m}$ rises steeply at low concentration, and $\alpha=\Lambda_{m}/\Lambda_{m}^{\circ}$.2.3
Ch 3 · Chemical Kinetics
TermMeaningUsed in
activated complexThe short-lived, highest-energy arrangement of atoms at the top of the energy profile between reactants and products (transition state).3.3
activation energyThe minimum extra energy $E_{a}$ that reacting molecules need to reach the activated complex; the height of the energy hill measured from the reactants.3.1 3.3 4.1 10.2
Arrhenius equation$k=Ae^{-E_{a}/RT}$: the temperature dependence of the rate constant; $\ln k$ against $1/T$ is a straight line of slope $-E_{a}/R$.3.3 10.2
average rateThe rate over a finite time interval, $-\Delta[\mathrm{R}]/\Delta t$: the slope of a chord on the concentration–time graph.3.1
catalystA substance that increases the rate of a reaction by providing a pathway of lower activation energy, and is recovered unchanged; it does not change $\Delta_{r}G$ or $K$.2.4 3.1 3.2 3.3
chemical kineticsThe branch of chemistry that studies the rates of reactions, the factors that change them and the mechanisms by which reactions occur.3.1
collision frequencyThe number of collisions between reacting molecules per second per unit volume, $Z_{\mathrm{AB}}$; proportional to $[\mathrm{A}][\mathrm{B}]$.3.3
effective collisionA collision that leads to reaction: the molecules have at least the threshold energy and a suitable orientation.3.3
elementary reactionA reaction that occurs in a single step exactly as written; its rate law can be written from its equation.3.1 6.2
first-order reactionA reaction whose rate is proportional to one concentration: $\ln[\mathrm{R}]=\ln[\mathrm{R}]_{0}-kt$, constant half-life $0.693/k$ (e.g. radioactive decay).3.1 3.2 3.3 10.1
half-lifeThe time for the concentration (or amount) of a reactant to fall to half its value; $t_{1/2}=0.693/k$ for first order.3.2 4.3 6.2
instantaneous rateThe rate at one moment, $-d[\mathrm{R}]/dt$: the slope of the tangent to the concentration–time curve at that moment.3.1
integrated rate equationAn equation, obtained by integrating a rate law, that gives the concentration of a reactant as a function of time, e.g. $[\mathrm{R}]=[\mathrm{R}]_{0}e^{-kt}$.3.2
inversion of cane sugarAcid-catalysed hydrolysis of sucrose into glucose and fructose; the optical rotation changes sign from + to −. A pseudo-first-order reaction.3.2 10.1
Maxwell–Boltzmann distributionThe spread of kinetic energies among the molecules of a gas at a given temperature; its high-energy tail beyond $E_{a}$ holds the molecules able to react.3.3
molecularityThe number of reacting species that collide simultaneously in one elementary step: 1, 2 or 3 (uni-, bi-, termolecular).3.1 6.2
order of reactionThe sum of the powers of the concentrations in the rate law; found by experiment and may be zero or fractional.3.1 6.2
pre-exponential factorThe constant $A$ in the Arrhenius equation, with the same units as $k$; related to the collision frequency and orientation of molecules.3.3 10.2
pseudo-first-order reactionA reaction with two or more reactants that follows first-order kinetics because the others are in large excess (e.g. acid hydrolysis of an ester in water).3.2 6.2 10.1
radioactive decayThe spontaneous breakdown of unstable nuclei; it always follows first-order kinetics, with a half-life characteristic of the isotope.3.2 4.3
rate constantThe constant $k$ in a rate law: the rate when all concentrations are $1\ \mathrm{mol\,L^{-1}}$. It depends on temperature; its units depend on the order.3.1 3.2 3.3 6.2
rate lawThe experimentally found expression $\text{rate}=k[\mathrm{A}]^{x}[\mathrm{B}]^{y}$ giving the rate in terms of concentrations.3.1 3.2 6.2 8.2
rate of reactionThe change in concentration of a reactant or product per unit time, divided by its stoichiometric coefficient; usual unit $\mathrm{mol\,L^{-1}\,s^{-1}}$.3.1 3.3 6.2
rate-determining stepThe slowest step of a mechanism, which limits the rate of the overall reaction.3.1 6.2 7.2
steric factorThe fraction $P$ of sufficiently energetic collisions that have a suitable orientation; rate $=P\,Z_{\mathrm{AB}}\,e^{-E_{a}/RT}$.3.3
temperature coefficientThe ratio of rate constants at two temperatures 10 K apart, $k_{T+10}/k_{T}$; about 2–3 for many reactions near room temperature.3.3
zero-order reactionA reaction whose rate does not depend on reactant concentration: $[\mathrm{R}]=[\mathrm{R}]_{0}-kt$, $t_{1/2}=[\mathrm{R}]_{0}/2k$ (e.g. $\mathrm{NH_{3}}$ on hot Pt).3.1 3.2
Ch 4 · The d- and f-Block Elements
TermMeaningUsed in
actinoidOne of the fourteen elements Th–Lr ($Z$ = 90–103) that fill the $5f$ subshell (Ac is usually included); all radioactive, with oxidation states up to $+7$; symbol An.4.3
actinoid contractionThe decrease in size of actinoid atoms and $\mathrm{M^{3+}}$ ions across the series; larger from element to element than the lanthanoid contraction because $5f$ electrons shield even more poorly.4.3
amphotericAble to react both as an acid and as a base; e.g. $\mathrm{Cr_{2}O_{3}}$ dissolves in acids and in fused alkalis.4.2 10.2
Bohr magnetonThe unit of atomic magnetic moment: $1\ \mathrm{BM}=9.27\times10^{-24}\ \mathrm{A\,m^{2}}$.4.1
charge-transfer transitionAbsorption of light that moves an electron from a ligand (e.g. oxygen) to the metal; it gives intense colours even to $d^{0}$ species such as $\mathrm{MnO_{4}^{-}}$ and $\mathrm{Cr_{2}O_{7}^{2-}}$.4.2
chromiteThe chief ore of chromium, $\mathrm{FeCr_{2}O_{4}}$ ($\mathrm{FeO\cdot Cr_{2}O_{3}}$), the starting material for chromates and dichromates.4.2
d-block elementAn element of groups 3–12 in which the last electron enters an $(n-1)d$ orbital; outer configuration $(n-1)d^{1-10}ns^{1-2}$.4.1
diamagneticWeakly repelled by a magnetic field; all electrons are paired (e.g. Zn²⁺, Sc³⁺).4.1 4.2 4.3 5.3
disproportionationA redox reaction in which one species is both oxidised and reduced, e.g. $\mathrm{3MnO_{4}^{2-}+4H^{+}\rightarrow2MnO_{4}^{-}+MnO_{2}+2H_{2}O}$.4.1 4.2 8.2
d–d transitionThe jump of an electron between $d$ orbitals that have been split in energy by ligands, absorbing visible light; it gives most transition-metal ions their colour (complementary to the light absorbed).5.3
enthalpy of atomisation$\Delta_{a}H^{\circ}$: the enthalpy change to turn one mole of an element into separate gaseous atoms; high for transition metals because $d$ electrons join in metallic bonding.4.1
f-block elementAn element in which the last electron enters an $(n-2)f$ orbital: the lanthanoids ($4f$) and actinoids ($5f$), placed in two rows below the main periodic table.4.3
f–f transitionExcitation of an electron within the $4f$ (or $5f$) subshell; gives lanthanoid ions their colours, with very narrow absorption bands because the $f$ orbitals are well shielded.
inner transition elementAnother name for an f-block element: the subshell being filled ($4f$ or $5f$) lies inside the $(n-1)d$ and $ns$ levels.4.3
interstitial compoundA compound formed when small atoms (H, C, N, B) occupy holes in a metal lattice, e.g. TiC, Mn₄N; usually non-stoichiometric, very hard, high-melting, metallically conducting and inert.4.1
lanthanoidOne of the fourteen elements Ce–Lu ($Z$ = 58–71) that fill the $4f$ subshell (La is usually included); characteristic oxidation state $+3$; symbol Ln.4.1 4.3
lanthanoid contractionThe steady decrease in atomic and ionic radii from La to Lu ($\mathrm{Ln^{3+}}$: 103 → 86 pm), due to poor shielding by $4f$ electrons; it makes the 4d and 5d metals of a group nearly the same size (Zr ≈ Hf).4.3
mischmetallAn alloy of about 95% lanthanoid metals (mainly Ce, La), about 5% iron and traces of S, C, Ca and Al; with magnesium it is used in lighter flints, bullets and shells.4.3
n-factorThe number of electrons gained or lost per formula unit in a redox reaction; for $\mathrm{MnO_{4}^{-}}$ it is 5 in acid, 3 in neutral and 1 in strongly alkaline solution.4.2
oxoanionA negative ion in which a central atom is bonded only to oxygen, e.g. $\mathrm{CrO_{4}^{2-}}$, $\mathrm{Cr_{2}O_{7}^{2-}}$, $\mathrm{MnO_{4}^{-}}$; transition metals reach their highest oxidation states in such ions.4.1 4.2
paramagneticAttracted into a magnetic field because of one or more unpaired electrons.4.1 4.2 4.3 5.3
primary standardA pure, stable, non-hygroscopic substance that can be weighed out accurately to make a solution of exactly known concentration, e.g. $\mathrm{K_{2}Cr_{2}O_{7}}$, sodium oxalate.4.2
self-indicatorA titrant whose own colour shows the end point; acidified $\mathrm{KMnO_{4}}$ is decolourised until the first excess drop leaves a permanent pink.4.2
spin-only magnetic moment$\mu=\sqrt{n(n+2)}\ \mathrm{BM}$ for $n$ unpaired electrons; a good estimate for 3d ions, which ignores the orbital contribution.4.1 4.3 5.3
transition elementAn element whose atom, or an ion in a common oxidation state, has an incompletely filled $d$ subshell ($d^{1}$–$d^{9}$). Zn, Cd and Hg are $d$-block elements but not transition elements.4.1 4.3
variable oxidation stateThe ability of an element to form stable compounds in two or more oxidation states; for transition metals these usually differ by one unit (e.g. Fe²⁺/Fe³⁺).4.1 4.3
Ch 5 · Coordination Compounds
TermMeaningUsed in
ambidentate ligandA ligand with two different possible donor atoms that binds through only one at a time: $\mathrm{NO_{2}^{-}}$ (through N or O), $\mathrm{SCN^{-}}$ (through S or N).5.1 5.2
chelateA complex in which a di- or polydentate ligand binds the same metal through two or more donor atoms, forming a ring that contains the metal; such ligands are chelating ligands. Chelates are especially stable.5.1 5.2 5.3
coordination compoundA compound containing a central metal atom or ion bonded to a fixed set of ions or molecules (ligands) that stays together in solution, e.g. $\mathrm{K_{4}[Fe(CN)_{6}]}$; unlike a double salt, it does not break up into all its simple ions.5.1 5.2 5.3
coordination entityThe central atom or ion together with the ligands bonded to it, written in square brackets: $\mathrm{[Co(NH_{3})_{6}]^{3+}}$, $\mathrm{[Ni(CO)_{4}]}$. It may be a cation, an anion or neutral.5.1
coordination isomerismStructural isomerism in which ligands are exchanged between a complex cation and a complex anion of different metals: $\mathrm{[Co(NH_{3})_{6}][Cr(CN)_{6}]}$ and $\mathrm{[Cr(NH_{3})_{6}][Co(CN)_{6}]}$.5.2
coordination numberThe number of donor atoms bonded directly to the central atom (not the number of ligands): 6 in $\mathrm{[Co(en)_{3}]^{3+}}$, 4 in $\mathrm{[Ni(CO)_{4}]}$.5.1 5.2 5.3
coordination sphereThe central atom and its ligands, written inside square brackets; ions outside the brackets are counter ions and ionise in solution.5.1 5.2
crystal field splittingThe energy gap between the two sets of d orbitals in a complex: $\Delta_{o}$ between $e_{g}$ and $t_{2g}$ in an octahedral field, $\Delta_{t}\approx\tfrac49\Delta_{o}$ between $t_{2}$ and $e$ in a tetrahedral field.5.3
crystal field stabilisation energyThe lowering of the d-electron energy in a crystal field relative to the average: $(-0.4x+0.6y)\Delta_{o}$ for $t_{2g}^{x}e_{g}^{y}$, plus $P$ for each extra pair when spin states are compared.5.3
crystal field theoryA model of complexes that treats ligands as point charges or dipoles and the metal–ligand bond as purely electrostatic; the ligands' field splits the energies of the metal's d orbitals.5.3
denticityThe number of donor atoms through which one ligand binds to the central atom: unidentate ($\mathrm{Cl^{-}}$), didentate (en, oxalate), hexadentate ($\mathrm{EDTA^{4-}}$).5.1 5.2 5.3
fac / mer isomersThe two geometrical isomers of an octahedral $\mathrm{[MA_{3}B_{3}]}$ complex: facial (fac), with the three B ligands on one face of the octahedron, and meridional (mer), with them on a meridian, two of them trans.5.2
geometrical isomerismStereoisomerism in which the same ligands occupy different relative positions around the central atom: cis (adjacent, 90°) or trans (opposite, 180°); fac or mer in $\mathrm{[MA_{3}B_{3}]}$. Found in square planar and octahedral, not tetrahedral, complexes.5.2 6.3 8.2
high-spin complexA complex with the maximum number of unpaired d electrons, formed when the splitting is smaller than the pairing energy ($\Delta\lt P$, weak-field ligands); e.g. $\mathrm{[Fe(H_{2}O)_{6}]^{2+}}$, $t_{2g}^{4}e_{g}^{2}$.5.3
homoleptic / heterolepticA homoleptic complex has only one kind of ligand ($\mathrm{[Co(NH_{3})_{6}]^{3+}}$); a heteroleptic complex has more than one kind ($\mathrm{[CoCl(NH_{3})_{5}]^{2+}}$).5.1 5.3
inner orbital complexAn octahedral complex whose metal uses inner $(n-1)d$ orbitals in $d^{2}sp^{3}$ hybridisation, after strong-field ligands have paired its d electrons; low-spin, e.g. $\mathrm{[Co(NH_{3})_{6}]^{3+}}$.5.3
ionisation isomerismStructural isomerism in which a counter ion and a ligand exchange places, so the isomers give different ions in solution: $\mathrm{[Co(NH_{3})_{5}(SO_{4})]Br}$ and $\mathrm{[CoBr(NH_{3})_{5}]SO_{4}}$.5.2
ligandAn ion or molecule bonded to the central atom of a coordination entity through a donor atom that gives it a lone pair (a Lewis base), e.g. $\mathrm{NH_{3}}$, $\mathrm{H_{2}O}$, $\mathrm{Cl^{-}}$, $\mathrm{CN^{-}}$.4.1 4.3 5.1 5.2
linkage isomerismStructural isomerism in which an ambidentate ligand binds through different donor atoms: $\mathrm{[Co(NH_{3})_{5}(NO_{2})]^{2+}}$ (nitrito-N) and $\mathrm{[Co(NH_{3})_{5}(ONO)]^{2+}}$ (nitrito-O).5.2
low-spin complexA complex in which d electrons pair in the lower set before entering the upper set, because $\Delta\gt P$ (strong-field ligands); e.g. $\mathrm{[Fe(CN)_{6}]^{4-}}$, $t_{2g}^{6}$.5.3
optical isomerismStereoisomerism shown by a chiral complex, one that cannot be superimposed on its mirror image; the two mirror-image forms rotate plane-polarised light equally in opposite directions ($d$ and $l$), e.g. $\mathrm{[Co(en)_{3}]^{3+}}$, cis-$\mathrm{[CoCl_{2}(en)_{2}]^{+}}$.5.2 9.1
outer orbital complexAn octahedral complex whose metal uses outer $nd$ orbitals in $sp^{3}d^{2}$ hybridisation, its $(n-1)d$ electrons staying unpaired; high-spin, e.g. $\mathrm{[CoF_{6}]^{3-}}$.5.3
pairing energy$P$: the extra energy needed to put a second electron, of opposite spin, into an orbital that already holds one.5.3
solvate isomerismStructural isomerism in which solvent molecules (water: hydrate isomerism) are ligands in one isomer but free lattice molecules in another: $\mathrm{[Cr(H_{2}O)_{6}]Cl_{3}}$ and $\mathrm{[CrCl(H_{2}O)_{5}]Cl_{2}\cdot H_{2}O}$.5.2
spectrochemical seriesLigands in order of increasing splitting $\Delta$: $\mathrm{I^{-}\lt Br^{-}\lt SCN^{-}\lt Cl^{-}\lt S^{2-}\lt F^{-}\lt OH^{-}\lt C_{2}O_{4}^{2-}\lt H_{2}O\lt NCS^{-}\lt EDTA^{4-}\lt NH_{3}\lt en\lt CN^{-}\lt CO}$.5.3
structural isomerismIsomerism in which the isomers differ in their bonds (which atoms are joined to which). In coordination compounds: linkage, coordination, ionisation and solvate isomerism.5.2 6.1 6.2 7.1
synergic bondingThe mutually reinforcing bonding in metal carbonyls: σ donation of the C lone pair of CO to the metal, and π back-donation from filled metal d orbitals into the empty $\pi^{*}$ orbital of CO.5.3
Werner's theoryThe first theory of coordination compounds (1893): a metal shows a primary, ionisable valence (its oxidation state) and a secondary, non-ionisable valence (its coordination number); the secondary valences point in fixed directions, giving a definite shape.5.1
Ch 6 · Haloalkanes and Haloarenes
TermMeaningUsed in
allylic halideA halide whose halogen is on an $sp^{3}$ carbon next to a $\mathrm{C{=}C}$ double bond, e.g. 3-chloroprop-1-ene $\mathrm{CH_{2}{=}CHCH_{2}Cl}$.6.1 6.2
ambident nucleophileA nucleophile with two different donor atoms, e.g. cyanide (C or N) and nitrite (O or N); KCN gives nitriles, AgCN isocyanides; KNO₂ gives alkyl nitrites, AgNO₂ nitroalkanes.6.2
benzylic halideA halide whose halogen is on an $sp^{3}$ carbon attached directly to an aromatic ring, e.g. (chloromethyl)benzene $\mathrm{C_{6}H_{5}CH_{2}Cl}$.6.1 6.2
biomagnificationThe increase in concentration of a persistent, fat-soluble substance (such as DDT) at each higher level of a food chain.6.3
chiralityThe property of an object or molecule of not being superimposable on its mirror image; a carbon carrying four different groups usually makes a molecule chiral.5.2 6.2 8.1 9.1
chlorofluorocarbonA compound of carbon, chlorine and fluorine (freon) such as $\mathrm{CCl_{2}F_{2}}$; once used as refrigerants and propellants, they release Cl atoms in the stratosphere that destroy ozone.6.1 6.3
DDT1,1,1-Trichloro-2,2-bis(4-chlorophenyl)ethane, $\mathrm{C_{14}H_{9}Cl_{5}}$: a chlorinated insecticide that persists in the environment and builds up in food chains.6.1 6.3
enantiomersStereoisomers that are non-superimposable mirror images; identical physical properties except that they rotate plane-polarised light by equal angles in opposite directions.5.2 6.2 8.1 8.2
Finkelstein reactionHalogen exchange making an alkyl iodide from an alkyl chloride or bromide with sodium iodide in dry acetone; the insoluble NaCl or NaBr precipitates and drives the reaction.6.1 6.2
Fittig reactionCoupling of two haloarene molecules with sodium in dry ether to give a biaryl, e.g. chlorobenzene to biphenyl.6.3
geminal dihalideA dihaloalkane with both halogen atoms on the same carbon, e.g. 1,1-dichloroethane $\mathrm{CH_{3}CHCl_{2}}$ (an alkylidene halide).
Grignard reagentAn alkyl- or arylmagnesium halide RMgX, made from RX and Mg in dry ether; its carbon is carbanion-like, a strong base and nucleophile; water converts it to RH.6.3 7.1 7.3 8.1
haloalkaneA compound in which halogen atoms replace hydrogen atoms of an aliphatic hydrocarbon, the halogen being on an $sp^{3}$ carbon (also called an alkyl halide), e.g. $\mathrm{CH_{3}CH_{2}Br}$. Classified as 1°, 2° or 3° by the number of carbons on the carbon bearing X.3.3 6.1 6.2 6.3
haloareneA compound with a halogen bonded directly to a carbon of an aromatic ring (also called an aryl halide), e.g. chlorobenzene $\mathrm{C_{6}H_{5}Cl}$; the C–X carbon is $sp^{2}$.3.3 6.1 6.3 7.1
nucleophilic substitutionA reaction in which a nucleophile (electron-pair donor) replaces a leaving group such as a halide ion: $\mathrm{Nu^{-}+R{-}X\rightarrow R{-}Nu+X^{-}}$.6.2 6.3 7.3 8.2
ozone depletionThinning of the stratospheric ozone layer, chiefly by chlorine and bromine atoms released from CFCs and halons in a catalytic chain reaction.6.3
racemic mixtureAn equimolar mixture of two enantiomers, written (±) or dl; optically inactive because the rotations cancel.5.2 6.2 8.2
racemisationConversion of one enantiomer into a racemic mixture, e.g. by an SN1 reaction through a planar carbocation.6.2
Sandmeyer reactionReplacement of the diazonium group of an arenediazonium salt by Cl or Br using copper(I) chloride in HCl or copper(I) bromide in HBr, with loss of $\mathrm{N_{2}}$.6.1 9.3
Saytzeff ruleIn dehydrohalogenation the major alkene is the more substituted one, with more alkyl groups on the doubly bonded carbons (Zaitsev's rule).6.3 7.2
SN1Unimolecular nucleophilic substitution: slow ionisation to a planar carbocation, then fast attack by the nucleophile; rate $=k[\mathrm{RX}]$, racemisation; reactivity $\mathrm{3^{\circ}\gt2^{\circ}\gt1^{\circ}\gt CH_{3}X}$.6.2 6.3
SN2Bimolecular nucleophilic substitution: a one-step reaction with backside attack, a single transition state, rate $=k[\mathrm{RX}][\mathrm{Nu^{-}}]$ and inversion of configuration; reactivity $\mathrm{CH_{3}X\gt1^{\circ}\gt2^{\circ}\gt3^{\circ}}$.6.2 6.3
stereocentreAn atom, usually an $sp^{3}$ carbon bonded to four different groups (asymmetric carbon, $\mathrm{C^{*}}$), at which swapping two groups gives a stereoisomer.6.2 9.1 10.1 10.2
Swarts reactionPreparation of an alkyl fluoride by heating an alkyl chloride or bromide with a metallic fluoride such as $\mathrm{AgF}$, $\mathrm{Hg_{2}F_{2}}$, $\mathrm{CoF_{2}}$ or $\mathrm{SbF_{3}}$.6.1
vicinal dihalideA dihaloalkane with the two halogen atoms on adjacent carbons, e.g. 1,2-dichloroethane $\mathrm{ClCH_{2}CH_{2}Cl}$; formed when halogens add to alkenes.6.1
vinylic halideA halide whose halogen is bonded to one of the $sp^{2}$ carbons of a $\mathrm{C{=}C}$ double bond, e.g. chloroethene $\mathrm{CH_{2}{=}CHCl}$; unreactive towards substitution.6.1 6.3
Walden inversionThe inversion of configuration at carbon caused by backside attack in an SN2 reaction, like an umbrella turning inside out.6.2
Wurtz reactionCoupling of two haloalkanes with sodium in dry ether: $\mathrm{2RX+2Na\rightarrow R{-}R+2NaX}$; gives alkanes with twice the carbon count.6.3
Wurtz–Fittig reactionCoupling of a haloarene and a haloalkane with sodium in dry ether to give an alkylarene: $\mathrm{ArX+RX+2Na\rightarrow Ar{-}R+2NaX}$.6.3
β-eliminationLoss of a hydrogen from a β-carbon and a halogen from the α-carbon of a haloalkane (dehydrohalogenation), usually with alcoholic KOH on heating, giving an alkene.6.3
Ch 7 · Alcohols, Phenols and Ethers
TermMeaningUsed in
acid-catalysed dehydrationLoss of water from an alcohol heated with conc. $\mathrm{H_{2}SO_{4}}$ or $\mathrm{H_{3}PO_{4}}$ to give an alkene, through a carbocation; ease 3° > 2° > 1°.7.2 7.3 8.3
alcoholA compound with one or more –OH groups, each bonded to an $sp^{3}$ (saturated) carbon atom, $\mathrm{R{-}OH}$, e.g. ethanol $\mathrm{CH_{3}CH_{2}OH}$.1.2 4.2 6.1 6.2
alkoxideThe anion $\mathrm{RO^{-}}$ formed when an alcohol loses the proton of its –OH, e.g. sodium ethoxide $\mathrm{C_{2}H_{5}O^{-}Na^{+}}$ from ethanol and sodium; a strong base.6.3 7.2 7.3 8.2
alkoxy groupThe group $\mathrm{RO{-}}$ (methoxy $\mathrm{CH_{3}O{-}}$, ethoxy $\mathrm{C_{2}H_{5}O{-}}$); ethers are named as alkoxy-substituted hydrocarbons (alkoxyalkanes).7.1
allylic alcoholAn alcohol with –OH on an $sp^{3}$ carbon next to a $\mathrm{C{=}C}$ double bond, e.g. prop-2-en-1-ol.7.1
anisoleMethoxybenzene, $\mathrm{C_{6}H_{5}OCH_{3}}$: an aromatic ether whose –OCH₃ group activates the ring and directs electrophiles ortho and para; HI cleaves it to phenol and iodomethane.7.1 7.3
benzylic alcoholAn alcohol with –OH on an $sp^{3}$ carbon attached directly to an aromatic ring, e.g. phenylmethanol $\mathrm{C_{6}H_{5}CH_{2}OH}$ (not a phenol).7.1 7.2
cumene processIndustrial route to phenol: cumene (isopropylbenzene) is oxidised by air to cumene hydroperoxide, which dilute acid splits into phenol and propanone.7.1
denatured alcoholCommercial ethanol made unfit for drinking by adding copper sulphate (colour) and pyridine (foul smell).7.2
epoxideA cyclic ether with a strained three-membered C–C–O ring (e.g. oxirane, $\mathrm{C_{2}H_{4}O}$); far more reactive than ordinary ethers.7.3
etherA compound in which an oxygen atom joins two alkyl or aryl groups, $\mathrm{R{-}O{-}R'}$; named as an alkoxyalkane, e.g. ethoxyethane.6.1 6.2 6.3 7.1
fermentationBreakdown of sugars by enzymes of yeast, in the absence of air: $\mathrm{C_{6}H_{12}O_{6}\rightarrow2C_{2}H_{5}OH+2CO_{2}}$ (zymase); the commercial source of ethanol.7.1 7.2
hydroboration–oxidationAddition of diborane to an alkene followed by oxidation with $\mathrm{H_{2}O_{2}/OH^{-}}$: adds water anti-Markovnikov, so propene gives propan-1-ol.7.1
Kolbe's reactionSodium phenoxide heated with $\mathrm{CO_{2}}$ under pressure, then acidified, gives 2-hydroxybenzoic acid (salicylic acid).7.2
Lucas testTest with anhydrous $\mathrm{ZnCl_{2}}$ in conc. $\mathrm{HCl}$: 3° alcohols turn it cloudy at once, 2° within about five minutes, 1° not at room temperature.7.2
MTBEMethyl tert-butyl ether, 2-methoxy-2-methylpropane $\mathrm{(CH_{3})_{3}COCH_{3}}$: a former petrol additive, withdrawn in many places because it contaminates groundwater.7.1 7.3
phenolA compound with an –OH group bonded directly to a carbon of an aromatic ring, $\mathrm{Ar{-}OH}$; also the name of the simplest one, $\mathrm{C_{6}H_{5}OH}$.1.2 6.1 6.3 7.1
phenoxide ionThe anion $\mathrm{C_{6}H_{5}O^{-}}$ formed when phenol loses a proton; its negative charge is delocalised over the oxygen and the ortho and para ring carbons.6.3 7.1 7.2 7.3
picric acid2,4,6-Trinitrophenol, a yellow solid and a strong acid ($\mathrm{p}K_{a}$ about 0.5) because three nitro groups stabilise its phenoxide ion.6.3 7.1 7.2
primary alcoholAn alcohol whose carbinol carbon (the one carrying –OH) is bonded to one other carbon, $\mathrm{RCH_{2}OH}$ (methanol is included).6.1 7.1 7.2 7.3
pyridinium chlorochromatePCC, $\mathrm{C_{5}H_{5}NH^{+}CrO_{3}Cl^{-}}$: a mild oxidising agent that converts primary alcohols into aldehydes without further oxidation to acids.7.2 8.1
Reimer–Tiemann reactionPhenol warmed with chloroform and aqueous NaOH, then acidified, gives 2-hydroxybenzaldehyde (salicylaldehyde).7.2
secondary alcoholAn alcohol whose carbinol carbon is bonded to two other carbons, $\mathrm{R_{2}CHOH}$, e.g. propan-2-ol.6.1 7.1 7.2 7.3
symmetrical etherAn ether whose two groups on oxygen are identical, e.g. ethoxyethane $\mathrm{C_{2}H_{5}OC_{2}H_{5}}$.7.1 7.3
tertiary alcoholAn alcohol whose carbinol carbon is bonded to three other carbons, $\mathrm{R_{3}COH}$, e.g. 2-methylpropan-2-ol.6.1 7.1 7.2 7.3
unsymmetrical etherAn ether whose two groups on oxygen are different, e.g. methoxyethane or methoxybenzene.7.1 7.3
Williamson synthesisPreparation of an ether by $\mathrm{S_{N}2}$ reaction of a sodium alkoxide or phenoxide with a methyl or primary alkyl halide: $\mathrm{RX+R'ONa\rightarrow ROR'+NaX}$.7.3
Ch 8 · Aldehydes, Ketones and Carboxylic Acids
TermMeaningUsed in
acyl chlorideA derivative $\mathrm{RCOCl}$ in which the OH of a carboxylic acid is replaced by Cl, made with $\mathrm{SOCl_{2}}$, $\mathrm{PCl_{5}}$ or $\mathrm{PCl_{3}}$; e.g. ethanoyl chloride, $\mathrm{CH_{3}COCl}$.7.2 8.1 8.3 9.2
aldehydeA carbonyl compound in which the carbonyl carbon carries at least one hydrogen atom: $\mathrm{R{-}CHO}$ (or $\mathrm{HCHO}$). IUPAC names end in -al (ethanal) or -carbaldehyde.7.1 7.2 8.1 8.2
aldol condensationReaction of an aldehyde or ketone having an α-hydrogen in dilute alkali: the enolate of one molecule adds to the carbonyl group of another, giving a β-hydroxy aldehyde or ketone (an aldol), which loses water on heating to give an α,β-unsaturated carbonyl compound.8.1 8.2
Cannizzaro reactionDisproportionation of an aldehyde with no α-hydrogen in concentrated alkali: one molecule is reduced to an alcohol and another oxidised to a carboxylate, e.g. $\mathrm{2HCHO\rightarrow CH_{3}OH+HCOO^{-}}$.8.2
carbonyl groupThe group $\mathrm{{>}C{=}O}$: an $sp^{2}$ carbon doubly bonded to oxygen, planar and polar ($\mathrm{\overset{\delta+}{C}{=}\overset{\delta-}{O}}$). It is the functional group of aldehydes and ketones and part of the carboxyl group.8.1 8.2 8.3 9.1
carboxyl groupThe functional group $\mathrm{{-}COOH}$: a carbonyl group and a hydroxyl group on the same carbon. Resonance with the OH lone pair makes its carbon less electrophilic than that of an aldehyde or ketone.8.3 10.2
carboxylate ionThe anion $\mathrm{RCOO^{-}}$ left when a carboxylic acid loses its proton. Its two resonance structures are equivalent, so the charge is shared by both oxygens and both C–O bonds are equal.8.3
carboxylic acidAn organic acid containing the carboxyl group, $\mathrm{R{-}COOH}$. IUPAC names end in -oic acid (ethanoic acid) or -carboxylic acid; typical $\mathrm{p}K_{a}$ values are about 2–5.7.1 7.2 8.1 8.2
Clemmensen reductionReduction of a carbonyl group to $\mathrm{CH_{2}}$ with zinc amalgam and concentrated hydrochloric acid, converting an aldehyde or ketone into a hydrocarbon.8.2
cross aldol condensationAn aldol condensation between two different carbonyl compounds. If both have α-hydrogens, four products form; it is useful when one partner (such as benzaldehyde, in the Claisen–Schmidt reaction) has no α-hydrogen.8.2
cyanohydrinA compound with $\mathrm{OH}$ and $\mathrm{CN}$ on the same carbon, $\mathrm{{>}C(OH)CN}$, formed by adding $\mathrm{HCN}$ (with a trace of base) to an aldehyde or ketone.8.2 8.3 10.1
decarboxylationLoss of $\mathrm{CO_{2}}$ from a carboxylic acid or its salt; heating a sodium carboxylate with sodalime gives an alkane with one carbon fewer: $\mathrm{RCOONa+NaOH\rightarrow RH+Na_{2}CO_{3}}$.8.3
DIBAL-HDiisobutylaluminium hydride, $\mathrm{AlH(i{-}Bu)_{2}}$: a reducing agent that converts nitriles and esters into aldehydes (after hydrolysis) and leaves $\mathrm{C{=}C}$ bonds untouched.8.1
esterificationFormation of an ester from a carboxylic acid and an alcohol in the presence of an acid catalyst: $\mathrm{RCOOH+R'OH\rightleftharpoons RCOOR'+H_{2}O}$. It is reversible; the C–OH bond of the acid breaks.7.2 8.3
Etard reactionOxidation of a methyl group on a benzene ring to $\mathrm{CHO}$ by chromyl chloride ($\mathrm{CrO_{2}Cl_{2}}$) in $\mathrm{CS_{2}}$, through a chromium complex that is then hydrolysed: toluene → benzaldehyde.8.1
fatty acidA long, unbranched aliphatic carboxylic acid (about $\mathrm{C_{12}}$–$\mathrm{C_{18}}$), such as octadecanoic (stearic) acid, found as esters in fats and oils; its sodium salts are soaps.8.3
Fehling's testHeating with Fehling's solution (copper(II) sulphate mixed with alkaline sodium potassium tartrate): aliphatic aldehydes give a red-brown precipitate of $\mathrm{Cu_{2}O}$; aromatic aldehydes and ketones do not.8.2 8.3 10.1
Friedel–Crafts acylationAttachment of an acyl group $\mathrm{RCO{-}}$ to an aromatic ring by an acyl chloride and anhydrous $\mathrm{AlCl_{3}}$, giving an aryl ketone: benzene + $\mathrm{CH_{3}COCl}$ → acetophenone.6.3 8.1 8.2
Gattermann–Koch reactionIntroduction of a $\mathrm{CHO}$ group into benzene (or an alkylbenzene) with carbon monoxide and hydrogen chloride in the presence of anhydrous $\mathrm{AlCl_{3}}$ or $\mathrm{CuCl}$.8.1
Hell–Volhard–Zelinsky reactionα-Halogenation of a carboxylic acid that has an α-hydrogen, by $\mathrm{Cl_{2}}$ or $\mathrm{Br_{2}}$ with a little red phosphorus, followed by hydrolysis: $\mathrm{RCH_{2}COOH\rightarrow RCH(X)COOH}$.8.3
iodoform testWarming with iodine and sodium hydroxide: compounds containing $\mathrm{CH_{3}CO{-}}$ (methyl ketones, ethanal) or $\mathrm{CH_{3}CH(OH){-}}$ give a yellow precipitate of iodoform, $\mathrm{CHI_{3}}$.8.2
ketoneA carbonyl compound in which the carbonyl carbon is bonded to two carbon atoms: $\mathrm{R{-}CO{-}R'}$. IUPAC names end in -one (propanone, butan-2-one).7.1 7.2 8.1 8.2
Kolbe electrolysisElectrolysis of an aqueous sodium or potassium carboxylate: at the anode two alkyl groups join, giving $\mathrm{R{-}R}$ and $\mathrm{CO_{2}}$ (e.g. ethane from sodium ethanoate).8.3
nucleophilic additionThe typical reaction of aldehydes and ketones: a nucleophile attacks the δ+ carbonyl carbon, the carbon becomes tetrahedral ($sp^{3}$) in an alkoxide intermediate, and protonation gives the product, e.g. a cyanohydrin or an alcohol.8.2 8.3
ozonolysisCleavage of a $\mathrm{C{=}C}$ bond by ozone followed by $\mathrm{Zn/H_{2}O}$: each doubly bonded carbon becomes a carbonyl carbon, giving aldehydes and/or ketones.8.1
Rosenmund reductionHydrogenation of an acyl chloride to an aldehyde over palladium poisoned with barium sulphate: $\mathrm{RCOCl+H_{2}\rightarrow RCHO+HCl}$.8.1 8.3
saponificationHydrolysis of an ester by aqueous alkali, giving the salt of the carboxylic acid and the alcohol: $\mathrm{RCOOR'+NaOH\rightarrow RCOONa+R'OH}$. Soap is made this way from fats.8.3
Stephen reactionReduction of a nitrile by $\mathrm{SnCl_{2}/HCl}$ to an imine, followed by hydrolysis to an aldehyde: $\mathrm{RCN\rightarrow RCH{=}NH\rightarrow RCHO}$.8.1
Tollens' testWarming with ammoniacal silver nitrate, $\mathrm{[Ag(NH_{3})_{2}]^{+}}$: aldehydes (aliphatic and aromatic) are oxidised and deposit a silver mirror; ketones do not react.8.2 10.1
Wolff–Kishner reductionReduction of a carbonyl group to $\mathrm{CH_{2}}$ by forming the hydrazone and heating it with $\mathrm{KOH}$ in ethylene glycol; nitrogen is evolved. Used for compounds stable to base.8.2
Ch 9 · Amines
TermMeaningUsed in
acetanilide$N$-phenylethanamide, $\mathrm{C_{6}H_{5}NHCOCH_{3}}$, made by acetylating aniline; used to protect the amino group so that the ring is substituted only once, mainly at the para position.9.2
acylation of aminesReplacement of an H on the nitrogen of a 1° or 2° amine by an acyl group $\mathrm{RCO{-}}$, using an acid chloride, anhydride or ester (with pyridine to remove HCl); the product is an amide. With benzoyl chloride it is called benzoylation.9.2
amineA derivative of ammonia in which one, two or three hydrogen atoms are replaced by alkyl or aryl groups; nitrogen keeps a lone pair, so amines are bases and nucleophiles.5.1 6.1 6.2 6.3
ammonolysisCleavage of the C–X bond of a haloalkane by ammonia (ethanolic $\mathrm{NH_{3}}$, sealed tube, about 373 K), giving a mixture of 1°, 2°, 3° amines and the quaternary salt.9.1
anilinium ion$\mathrm{C_{6}H_{5}NH_{3}^{+}}$, protonated aniline; it has no lone pair, is deactivating and meta-directing, which is why direct nitration of aniline gives much 3-nitroaniline.9.1 9.2
arylamineAn amine whose nitrogen is bonded directly to a carbon of an aromatic ring, e.g. aniline $\mathrm{C_{6}H_{5}NH_{2}}$; benzylamine, with N on a $\mathrm{CH_{2}}$, is not one.6.1 9.1 9.2 9.3
azo dyeA coloured compound containing the azo group $\mathrm{{-}N{=}N{-}}$ joining two aromatic rings, e.g. orange 4-hydroxyazobenzene; the extended conjugation absorbs visible light.9.2 9.3
Balz–Schiemann reactionPreparation of a fluoroarene: the diazonium salt is precipitated as its fluoroborate with $\mathrm{HBF_{4}}$, and heating the dry salt gives $\mathrm{ArF+BF_{3}+N_{2}}$.9.3
basicity of aminesThe readiness of an amine's nitrogen lone pair to accept a proton, measured by $K_{b}$ or $\mathrm{p}K_{b}$ (smaller $\mathrm{p}K_{b}$ = stronger base); set by the inductive effect, solvation, steric hindrance and, in arylamines, resonance.9.2
carbylamine reactionA primary amine heated with chloroform and ethanolic KOH gives a foul-smelling isocyanide: $\mathrm{RNH_{2}+CHCl_{3}+3KOH\rightarrow RNC+3KCl+3H_{2}O}$; a test for 1° amines.9.2
coupling reactionElectrophilic substitution of a phenol (mildly alkaline) or an arylamine (mildly acidic), usually at the para position, by an arenediazonium ion; both nitrogens are kept and an azo compound $\mathrm{Ar{-}N{=}N{-}Ar'}$ forms.9.3
diazonium saltA salt $\mathrm{R{-}N_{2}^{+}X^{-}}$ containing the $\mathrm{{-}N_{2}^{+}}$ group; arenediazonium salts such as benzenediazonium chloride are stable for a while in cold solution because the positive charge is delocalised over the ring.6.1 7.1 9.2 9.3
diazotisationConversion of a primary aromatic amine into its diazonium salt with nitrous acid ($\mathrm{NaNO_{2}}$ + HCl) at 273–278 K: $\mathrm{ArNH_{2}+NaNO_{2}+2HCl\rightarrow ArN_{2}^{+}Cl^{-}+NaCl+2H_{2}O}$.6.1 7.1 9.3
Gabriel phthalimide synthesisPotassium phthalimide + haloalkane → $N$-alkylphthalimide, then alkaline hydrolysis → a pure primary amine; it cannot make arylamines.9.1
Gattermann reactionReplacement of the diazonium group by Cl or Br using copper powder with HCl or HBr; similar to the Sandmeyer reaction but usually in lower yield.9.3
Hinsberg's reagentBenzenesulphonyl chloride, $\mathrm{C_{6}H_{5}SO_{2}Cl}$: with a 1° amine it gives a sulphonamide soluble in alkali, with a 2° amine one insoluble in alkali, and with a 3° amine no reaction.9.2
Hoffmann bromamide degradation$\mathrm{RCONH_{2}+Br_{2}+4NaOH\rightarrow RNH_{2}+Na_{2}CO_{3}+2NaBr+2H_{2}O}$: a primary amide gives a primary amine with one carbon fewer, R migrating from C to N.9.1
isocyanideA compound $\mathrm{R{-}N{\equiv}C}$ (carbylamine), isomeric with the nitrile $\mathrm{R{-}C{\equiv}N}$; toxic, with an extremely unpleasant smell.6.2 9.2
phosphinic acid$\mathrm{H_{3}PO_{2}}$ (hypophosphorous acid), a reducing agent that replaces the diazonium group by hydrogen, removing an amino group from a ring after it has served as a directing group.9.3
pKb$\mathrm{p}K_{b}=-\log K_{b}$, where $K_{b}=[\mathrm{RNH_{3}^{+}}][\mathrm{OH^{-}}]/[\mathrm{RNH_{2}}]$; for an amine and its conjugate acid $\mathrm{p}K_{a}+\mathrm{p}K_{b}=14.00$ at 298 K.
primary amineAn amine with one carbon group on nitrogen, $\mathrm{R{-}NH_{2}}$, e.g. ethanamine; the label counts the groups on N, not the type of carbon.6.2 8.2 9.1 9.2
quaternary ammonium saltAn ionic compound $\mathrm{R_{4}N^{+}X^{-}}$ in which nitrogen carries four carbon groups and a positive charge and has no lone pair, e.g. $\mathrm{(CH_{3})_{4}N^{+}Cl^{-}}$.6.2 9.1 9.2
secondary amineAn amine with two carbon groups on nitrogen, $\mathrm{R_{2}NH}$ or $\mathrm{RR'NH}$, e.g. $N$-methylethanamine; it has one N–H.9.1 9.2
sulphanilic acid4-Aminobenzenesulphonic acid, made by heating anilinium hydrogensulphate at 453–473 K; it exists as the zwitterion $\mathrm{{}^{+}H_{3}NC_{6}H_{4}SO_{3}^{-}}$.9.2 9.3
tertiary amineAn amine with three carbon groups on nitrogen, $\mathrm{R_{3}N}$, e.g. trimethylamine; it has no N–H, so it cannot hydrogen-bond to itself.6.2 9.1 9.2
Ch 10 · Biomolecules
TermMeaningUsed in
aldose / ketoseA monosaccharide containing an aldehyde group (aldose, e.g. glucose, an aldohexose) or a keto group (ketose, e.g. fructose, a ketohexose).10.1
amino acidA compound containing an amino group and a carboxyl group; proteins are built from about twenty α-amino acids, $\mathrm{H_{2}N{-}CH(R){-}COOH}$, which differ in the side chain R.8.3 9.1 9.2 10.2
anomersRing forms of a sugar that differ only in configuration at the anomeric carbon (C1 of an aldose, C2 of a ketose), the carbon of the former C=O group: α- and β-D-glucopyranose.10.1
carbohydrateAn optically active polyhydroxy aldehyde or polyhydroxy ketone, or a compound that gives these on hydrolysis: sugars, starch, cellulose, glycogen.10.1 10.3
complementary base pairingThe specific hydrogen bonding of bases between the two strands of DNA: adenine with thymine (two H-bonds) and guanine with cytosine (three), so each strand fixes the sequence of the other.10.3
denaturationLoss of the biological activity of a protein when heat or a change of pH disrupts the hydrogen bonds and other weak interactions, destroying the secondary and tertiary structure while the primary structure remains; e.g. boiling egg white.7.1 10.2
disaccharideAn oligosaccharide that gives two monosaccharide units on hydrolysis, $\mathrm{C_{12}H_{22}O_{11}}$ for two hexoses: sucrose (glucose + fructose), maltose (2 glucose), lactose (galactose + glucose).10.1
DNADeoxyribonucleic acid: two complementary polynucleotide strands (sugar 2-deoxyribose; bases A, G, C, T) coiled into a double helix; it stores hereditary information and replicates.5.2 6.2 10.2 10.3
enzymeA biological catalyst, almost always a globular protein, that speeds up a specific reaction of its substrate under mild conditions by lowering the activation energy; named with the ending -ase (maltase, invertase).3.3 5.3 6.2 7.2
essential amino acidsAmino acids that the human body cannot make and that must be supplied in the diet (valine, leucine, isoleucine, arginine, lysine, threonine, methionine, phenylalanine, tryptophan, histidine); those the body can make are non-essential.10.2
fat-soluble / water-soluble vitaminsVitamins A, D, E and K dissolve in fats and are stored in the liver and fat tissue; the B group and C dissolve in water, are excreted in urine and (except B₁₂) must be supplied regularly.10.3
glycosidic linkageThe C–O–C link that joins two monosaccharide units, formed by loss of water between the anomeric OH of one unit and an OH of the other; e.g. α(1→4) in maltose.10.1
hormoneA chemical messenger made by an endocrine gland, carried by the blood to target organs where it acts in tiny amounts; steroids (testosterone), polypeptides (insulin) or amino acid derivatives (thyroxine).6.1 10.3
invert sugarThe equimolar, laevorotatory mixture of D-glucose and D-fructose formed by hydrolysis of dextrorotatory sucrose; the sign of rotation is inverted.10.1
isoelectric pointThe pH at which an amino acid (or protein) has zero net charge, existing mainly as the zwitterion, so that it does not move in an electric field; about 6 for glycine.10.2
monosaccharideA carbohydrate that cannot be hydrolysed into simpler polyhydroxy aldehydes or ketones, e.g. glucose, fructose, ribose, galactose.10.1
nucleic acidA polymer of nucleotides (a polynucleotide) that stores or transmits genetic information: DNA and RNA.10.1 10.3
nucleosideA nitrogenous base joined to C1′ of a pentose sugar (ribose or 2-deoxyribose), e.g. adenosine; base + sugar − H₂O.10.3
nucleotideA nucleoside carrying a phosphate group on the sugar, usually at C5′ (base + sugar + phosphate); the monomer unit of nucleic acids.10.3
oligosaccharideA carbohydrate that gives two to ten monosaccharide units on hydrolysis (disaccharides, trisaccharides, …).10.1
peptide bondThe amide link $\mathrm{{-}CO{-}NH{-}}$ formed between the carboxyl group of one amino acid and the amino group of another with loss of water; planar and rigid.10.2
phosphodiester linkageThe phosphate group that joins C3′ of one nucleotide's sugar to C5′ of the next, forming the sugar–phosphate backbone of a nucleic acid.10.3
polypeptideA chain of more than ten amino acid residues joined by peptide bonds; one with more than about a hundred residues (molar mass above about 10 000 u) is called a protein.10.2 10.3
polysaccharideA carbohydrate that gives a large number of monosaccharide units on hydrolysis; not sweet (a non-sugar): starch, cellulose, glycogen.10.1
primary structureThe sequence in which amino acids are joined in each polypeptide chain of a protein, held by peptide bonds.10.2
reducing sugarA carbohydrate that reduces Fehling's solution and Tollens' reagent because it has a free anomeric carbon whose ring can open to an aldehyde or keto group: all monosaccharides, maltose, lactose. Sucrose is a non-reducing sugar.10.1
RNARibonucleic acid: usually a single polynucleotide strand (sugar ribose; bases A, G, C, U). Messenger, ribosomal and transfer RNA work together in protein synthesis.10.3
secondary structureThe local shape of a polypeptide chain held by hydrogen bonds between C=O and N–H groups of peptide bonds: the α-helix (a right-handed coil) or the β-pleated sheet (extended chains side by side).10.2
vitaminAn organic compound needed in small amounts in the diet for normal growth and health, which the body cannot make in sufficient amount; its long-term lack causes a deficiency disease (e.g. vitamin C: scurvy).5.1 5.3 10.3
zwitterionThe dipolar ion $\mathrm{H_{3}\overset{+}{N}{-}CH(R){-}COO^{-}}$ formed when the carboxyl group of an amino acid passes a proton to its own amino group; neutral overall and amphoteric.9.2 10.2